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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020618.1_15658_16835_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15658 - 16835

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCAG

5'SS Class:

major

3'SS Sequence:

CGGGGGGGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAACAG

U12 Branch Point Sequence:

TCTGCCCGCAGG

Flanking Amino Acid:

AERPKVFFIQLDQGVFLETD

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

60.5

45.8

Major BPS

-0.6

1.4

40.7

38.3

Major PPT

45.2

-0.2

1.2

30.1

41.5

Minor 5ss

35.6

-1.6

3.3

46.7

48.6

Minor BPS

37.1

-1.1

2.3

44.27

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001053

Chromosome:

PEDO01020618.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001041

13309 - 17338

4030