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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020618.1_16948_17021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16948 - 17021

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGCAT

U12 Branch Point Sequence:

TCCAACGCATCT

Flanking Amino Acid:

NTAVMFACSPGYGAFLNPSG

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

53.4

0.08

1.3

63.4

35.6

Major PPT

82.5

0.73

0.7

76.7

25.3

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

-0.9

2.3

53.56

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001053

Chromosome:

PEDO01020618.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001041

13309 - 17338

4030