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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020634.1_1800_2059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1800 - 2059

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAA

U12 Branch Point Sequence:

ACCCCGCTGACA

Flanking Amino Acid:

AGTPPGTRRSDTSGTQPPAT

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

48.4

-0.1

1.2

56.4

39.5

Major PPT

71.1

0.47

0.8

64.8

30.8

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

42.2

-0.6

2.2

50.75

40.6

Associated Gene:

Gene:

PRRT3

Ensembl Gene ID:

ENSAPLG00000016944

Chromosome:

PEDO01020634.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047152

21 - 3682

3662

ENSAPLT00000025168

21 - 3682

3662