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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020661.1_133_355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133 - 355

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TGTGCTGTCACG

Flanking Amino Acid:

MSSGPVVAMVWQGLDVVKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

63.5

0.3

0.9

58.5

37.5

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

43.7

-0.6

2.4

55.14

46.4

Associated Gene:

Gene:

NME3

Ensembl Gene ID:

ENSAPLG00000005317

Chromosome:

PEDO01020661.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005485

106 - 1368

1263