Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020687.1_2415_2493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2415 - 2493

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CTCTGCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCATGCTCACCC

Flanking Amino Acid:

LDREHMDKYHLFSHAVSENG

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.4

68.2

38.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

0.56

0.8

68.7

31.7

Minor 5ss

33.9

-1.8

3.4

43.2

37.6

Minor BPS

43.3

-0.5

2.2

50.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020626

Chromosome:

PEDO01020687.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032123

3 - 4935

4933

ENSAPLT00000018962

8 - 4935

4928