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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020687.1_3067_4766_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3067 - 4766

Intron Length:

1700

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCG|GCCCGGTTC

5'SS Class:

major

3'SS Sequence:

GAGCCCCCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTAAT

U12 Branch Point Sequence:

CTGCAGGTAATG

Flanking Amino Acid:

VESPPLAAVLGKHPRPPDLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.26

1.3

59.1

42.7

Major BPS

60.4

0.26

1.3

61.4

43.2

Major PPT

58.7

0.2

0.9

47.3

36.3

Minor 5ss

25.8

-2.8

4.2

41.7

45.2

Minor BPS

36.3

-1.1

2.5

40.95

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020626

Chromosome:

PEDO01020687.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032123

3 - 4935

4933

ENSAPLT00000030554

891 - 4935

4045

ENSAPLT00000018962

8 - 4935

4928