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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020687.1_369_477_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

369 - 477

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GCGGCTGACGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

ACACGGTCACCT

Flanking Amino Acid:

WAVEVGDTGKPLEQEEYSVY

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

82.3

26.5

Major BPS

72.7

0.56

30.1

Major PPT

42.7

-0.4

1.7

38.4

39.1

Minor 5ss

20.1

-3.4

4.3

47.1

Minor BPS

34.5

-1

2.4

48.59

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020626

Chromosome:

PEDO01020687.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032123

3 - 4935

4933