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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020709.1_11028_11624_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11028 - 11624

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGAGGAC

5'SS Class:

major

3'SS Sequence:

CAAAACCATCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAAAA

U12 Branch Point Sequence:

TGGCCATCAAAA

Flanking Amino Acid:

GGPSWGGDWGLGSQHDHPIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.3

59.2

39.7

Major BPS

59.3

0.23

65.3

28.1

Major PPT

0.14

44.3

41.8

Minor 5ss

16.7

-3.8

4.1

21.6

38.4

Minor BPS

46.3

-0.2

1.9

57.18

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023629

Chromosome:

PEDO01020709.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041754

8684 - 11750

3067