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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020709.1_8700_10830_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8700 - 10830

Intron Length:

2131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGTGCTGC

5'SS Class:

weak_major

3'SS Sequence:

TCCCGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

GAGGGCTGAACC

Flanking Amino Acid:

TGKVLSATGDENRIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.1

45.8

39.2

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

71.1

0.47

0.8

64.8

30.8

Minor 5ss

46.8

-0.3

2.7

58.7

46.2

Minor BPS

46.2

-0.3

53.16

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023629

Chromosome:

PEDO01020709.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041754

8684 - 11750

3067