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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020785.1_1115_1541_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1115 - 1541

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCTGGCAC

5'SS Class:

weak_major

3'SS Sequence:

CCCGCCGAACAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

GCGCCGTGAAAC

Flanking Amino Acid:

MPSWPYPIFFFGTHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.3

50.1

43.6

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

46.2

-0.2

1.1

37.7

32.6

Minor 5ss

22.7

-3.1

3.9

33.5

Minor BPS

41.7

-0.6

2.1

46.86

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030450

Chromosome:

PEDO01020785.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028068

17 - 1556

1540