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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020810.1_2996_3130_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2996 - 3130

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGA

5'SS Class:

major

3'SS Sequence:

GCACCGCCGCGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

GCTTTTCCACCC

Flanking Amino Acid:

AAALGAVARQGSGSAPPGTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

59.4

41.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

42.3

-0.4

1.6

35.1

36.2

Minor 5ss

29.8

-2.3

3.2

43.5

Minor BPS

41.6

-0.6

1.9

51.09

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018606

Chromosome:

PEDO01020810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033638

2886 - 3251

366