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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020820.1_1561_1669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1561 - 1669

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCGCTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

AATTTGTGATTT

Flanking Amino Acid:

TPSMAVLEGEVYILCSASVC

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.4

0.39

0.9

60.5

35.3

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

43.9

-0.3

2.2

63.85

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014341

Chromosome:

PEDO01020820.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014936

523 - 1942

1420