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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020838.1_2077_2171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2077 - 2171

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

TGTGGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

CACCCCGTAACA

Flanking Amino Acid:

YGFKLQSLDLLLDTKSTDRK

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

60.2

38.7

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

66.6

0.37

0.9

58.7

38.3

Minor 5ss

24.3

-3

3.3

28.8

38.7

Minor BPS

51.1

0.03

2.1

61.72

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014153

Chromosome:

PEDO01020838.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026044

693 - 3271

2579

ENSAPLT00000014733

124 - 2555

2432