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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020839.1_1126_1923_R

Intron Information:

Intron Rank:

150961

Intron Class:

major

Intron Phase:

Intron Coordinates:

1126 - 1923

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAG

U12 Branch Point Sequence:

TTTCTCTTGTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

-0.1

1.6

46.5

Major PPT

0.74

0.8

77.2

31.6

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

-0

3.5

84.21

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028724

Chromosome:

PEDO01020839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033872

398 - 2139

1742