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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020839.1_905_1064_R

Intron Information:

Intron Rank:

150963

Intron Class:

major

Intron Phase:

Intron Coordinates:

905 - 1064

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAG

U12 Branch Point Sequence:

TTGTAAGCACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

60.5

0.26

1.7

69.7

44.2

Major PPT

80.8

0.69

0.9

72.8

42.2

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

30.9

-1.5

2.3

39.01

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028724

Chromosome:

PEDO01020839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033872

398 - 2139

1742

ENSAPLT00000039529

398 - 1705

1308