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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020853.1_1299_2128_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1299 - 2128

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACCGTAC

5'SS Class:

weak_major

3'SS Sequence:

TTCCTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAT

U12 Branch Point Sequence:

GGAACAGCAGCC

Flanking Amino Acid:

LMQEPSPILPSIPGMSRFHR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.2

54.9

39.4

Major BPS

46.8

-0.2

1.4

53.8

41.9

Major PPT

72.5

0.51

68.8

37.2

Minor 5ss

43.2

-0.7

3.4

57.7

41.8

Minor BPS

33.4

-1.2

2.2

39.81

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018920

Chromosome:

PEDO01020853.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018590

332 - 2204

1873