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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020872.1_486_803_F

Intron Information:

Intron Rank:

140614

Intron Class:

major

Intron Phase:

Intron Coordinates:

486 - 803

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGAGAC

U12 Branch Point Sequence:

ACTGCAGAGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

43.7

-0.4

33.8

31.5

Major PPT

80.9

0.69

0.8

72.8

37.5

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

37.7

-0.9

2.4

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025710

Chromosome:

PEDO01020872.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026077

291 - 1798

1508