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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020885.1_11934_12004_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11934 - 12004

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

GGCGCCGCCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

TCCGGGCTAACG

Flanking Amino Acid:

CRLCQVAAANRPSLAEHLRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

59.7

41.3

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

0.14

50.1

39.3

Minor 5ss

28.5

-2.5

3.1

35.6

41.4

Minor BPS

37.1

-1.1

2.5

42.94

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021726

Chromosome:

PEDO01020885.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028636

8845 - 12338

3494