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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020885.1_3971_4239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3971 - 4239

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCTGGGGCT

5'SS Class:

major

3'SS Sequence:

CCTCATCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

CATGCCTCATCC

Flanking Amino Acid:

PCLGKPLQARASAWVNVFLW

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.4

64.6

38.4

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

71.7

0.49

0.8

65.1

30.2

Minor 5ss

16.1

-3.9

3.9

22.4

37.3

Minor BPS

48.5

-0.1

1.9

59.63

45.3

Associated Gene:

Gene:

TMEM179B

Ensembl Gene ID:

ENSAPLG00000007439

Chromosome:

PEDO01020885.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007721

3812 - 5085

1274