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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020885.1_4666_4989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4666 - 4989

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGGG

5'SS Class:

major

3'SS Sequence:

CTCCCCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAACAC

U12 Branch Point Sequence:

CCCCCCCCAACA

Flanking Amino Acid:

VCASALTVAQGEFGGQCLLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.36

1.2

51.9

45.4

Major BPS

45.9

-0.2

33.6

Major PPT

74.5

0.55

0.7

69.2

24.6

Minor 5ss

34.3

-1.8

3.5

47.6

47.8

Minor BPS

46.1

-0.3

1.9

53.63

44.5

Associated Gene:

Gene:

TMEM179B

Ensembl Gene ID:

ENSAPLG00000007439

Chromosome:

PEDO01020885.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007721

3812 - 5085

1274