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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020885.1_6205_6277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6205 - 6277

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

CTCCTTGGGATT

Flanking Amino Acid:

DGHKVYGAILVAVERLLKMK

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

74.1

0.54

0.8

65.3

36.2

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

-0.7

1.9

51.36

Associated Gene:

Gene:

TAF6L

Ensembl Gene ID:

ENSAPLG00000023037

Chromosome:

PEDO01020885.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020917

5479 - 8177

2699