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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020885.1_6407_6506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6407 - 6506

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGAACAA

U12 Branch Point Sequence:

GCCCCTAGAACA

Flanking Amino Acid:

VVGLHALGWKAVERVLYPHL

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

45.2

-0.3

1.1

47.1

36.1

Major PPT

80.3

0.68

0.8

73.8

31.3

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

45.4

-0.3

1.7

51.35

Associated Gene:

Gene:

TAF6L

Ensembl Gene ID:

ENSAPLG00000023037

Chromosome:

PEDO01020885.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020917

5479 - 8177

2699