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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020912.1_400_1060_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

400 - 1060

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGGGAGAT

5'SS Class:

weak_major

3'SS Sequence:

AGTGAAGCCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TTGTCTTGAAAG

Flanking Amino Acid:

PSDDGQYVCTPHALPPATGA

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.1

55.4

37.7

Major BPS

74.6

0.61

65.6

41.4

Major PPT

52.9

0.07

1.1

40.4

43.3

Minor 5ss

28.2

-2.5

3.7

48.4

Minor BPS

59.8

0.17

1.6

65.5

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024951

Chromosome:

PEDO01020912.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020180

2 - 1477

1476