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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020912.1_84_124_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84 - 124

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCGGGAATC

5'SS Class:

weak_major

3'SS Sequence:

ACAAATGGCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

CATCCCTGCACA

Flanking Amino Acid:

CVVRNSRLQQDQGEVSLATA

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.3

63.1

38.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

50.1

1.1

41.7

Minor 5ss

22.1

-3.2

30.3

36.8

Minor BPS

49.6

-0

63.14

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024951

Chromosome:

PEDO01020912.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020180

2 - 1477

1476