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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020922.1_1184_1267_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1184 - 1267

Intron Length:
84

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTT|GTAGGTATC

5'SS Class:
major

3'SS Sequence:
CTCCACCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTCCAC

U12 Branch Point Sequence:
TGCCTCTCCACC

Flanking Amino Acid:
LVCARHLRIFDYEPTIFYPK

Intron Amino Acid Position:
50

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.8
0.44
1.1
70.9
39.2

Major BPS
54.8
0.12
1.3
66.4
39.9

Major PPT
68.9
0.43
0.9
62
33.4

Minor 5ss
41.5
-0.9
3.2
59.7
39.2

Minor BPS
46.1
-0.3
1.9
56.33
42

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01020922.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

247 - 2760
2514

179 - 2760
2582