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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020922.1_4871_5333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4871 - 5333

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCA

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGCACCCCAGCC

Flanking Amino Acid:

SLADLDLDTAGGGAEWTSWF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

64.9

40.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

66.6

0.37

56.9

43.3

Minor 5ss

37.1

-1.5

3.2

48.2

47.5

Minor BPS

42.7

-0.5

53.43

43.5

Associated Gene:

Gene:

CILP2

Ensembl Gene ID:

ENSAPLG00000029852

Chromosome:

PEDO01020922.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042741

3704 - 10152

6449