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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020922.1_5978_6549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5978 - 6549

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACC

5'SS Class:

strong_major

3'SS Sequence:

CATCTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CGATGCCCACCC

Flanking Amino Acid:

RRACSAGPCPEPTWTEWGAW

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

34.7

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

76.9

0.61

0.8

30.4

Minor 5ss

32.1

-2

3.3

43.2

44.2

Minor BPS

-1

2.2

44.87

42.9

Associated Gene:

Gene:

CILP2

Ensembl Gene ID:

ENSAPLG00000029852

Chromosome:

PEDO01020922.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042741

3704 - 10152

6449