Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020924.1_17750_22518_R

Intron Information:

Intron Rank:

138659

Intron Class:

major

Intron Phase:

Intron Coordinates:

17750 - 22518

Intron Length:

4769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

AATCTTTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCATTTGGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

72.5

0.51

1.1

75.9

37.3

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

46.3

-0.2

64.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022103

Chromosome:

PEDO01020924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027329

16181 - 22647

6467