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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020946.1_8066_8181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8066 - 8181

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCGTGG

5'SS Class:

major

3'SS Sequence:

CCGTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAA

U12 Branch Point Sequence:

GGACCCTCAGCA

Flanking Amino Acid:

VHSEGDDFLEVNSMKELYLL

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

52.4

46.9

Major BPS

46.6

-0.2

1.4

53.9

41.5

Major PPT

71.2

0.48

0.8

65.1

30.6

Minor 5ss

40.6

-1

3.4

48.2

Minor BPS

47.8

-0.1

1.8

56.59

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002057

Chromosome:

PEDO01020946.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002126

4265 - 11619

7355