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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020947.1_1600_2056_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1600 - 2056

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCGCCTGAG

5'SS Class:

weak_major

3'SS Sequence:

CCCACGTTGGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCATCCCCATGC

Flanking Amino Acid:

PGLHRGLEYRGCPHDCTGGR

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.3

48.4

45.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

57.4

0.17

52.8

36.6

Minor 5ss

20.3

-3.4

3.9

21.5

37.9

Minor BPS

-0.9

2.1

43.8

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028108

Chromosome:

PEDO01020947.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038785

24 - 2132

2109