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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021057.1_1812_2339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1812 - 2339

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

ATCTGAGGAAAT

Flanking Amino Acid:

LWNRTVAACQILQRVEDNTI

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

-0.9

2.4

57.64

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009759

Chromosome:

PEDO01021057.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010207

1558 - 8229

6672