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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021057.1_3505_4812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3505 - 4812

Intron Length:

1308

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

AGCAATGTAACT

Flanking Amino Acid:

EENWKFEKNNDFGDVVYTFE

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.2

21.2

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

76.8

0.6

0.9

72.7

37.5

Minor 5ss

29.4

-2.4

4.3

41.4

Minor BPS

44.6

-0.3

2.1

60.63

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009759

Chromosome:

PEDO01021057.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010207

1558 - 8229

6672