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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021063.1_2578_4485_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

2578 - 4485

Intron Length:

1908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

CCTTAGCGCGCAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCCTTAG

U12 Branch Point Sequence:

CAGTCCTTAGCG

Flanking Amino Acid:

HDYWLLAGIVLHGYARWTDI

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.2

-0

1.3

50.1

41.8

Major BPS

54.9

0.12

1.6

53.6

43.8

Major PPT

63.7

0.31

57.1

38.3

Minor 5ss

95.2

1.52

0.7

94.3

17.7

Minor BPS

60.3

0.18

1.7

60.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025986

Chromosome:

PEDO01021063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047402

1650 - 5219

3570

ENSAPLT00000042251

650 - 7816

7167

ENSAPLT00000020516

2191 - 7816

5626