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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021063.1_4742_5170_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

4742 - 5170

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTCCCCTTC

5'SS Class:

weak_minor

3'SS Sequence:

GGCCGGCGGGAAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AGCCGAA

U12 Branch Point Sequence:

CGCGCGCCAACG

Flanking Amino Acid:

VPKDPVPEPPYKAEKPRFMF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-0.4

1.4

39.4

41.9

Major BPS

44.3

-0.3

1.2

35.9

33.9

Major PPT

43.6

-0.3

1.1

32.7

35.7

Minor 5ss

54.3

0.15

2.9

77.4

37.6

Minor BPS

35.3

-1.2

2.3

36.5

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025986

Chromosome:

PEDO01021063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047402

1650 - 5219

3570