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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021063.1_5376_5584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5376 - 5584

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

GTGACGCCAGCT

Flanking Amino Acid:

PKGPEKMETEAPVPEAPPSP

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

50.8

0.02

1.5

37.5

Major PPT

73.1

0.52

0.9

66.4

35.7

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

36.1

-0.9

2.4

54.85

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025986

Chromosome:

PEDO01021063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042251

650 - 7816

7167

ENSAPLT00000020516

2191 - 7816

5626