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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021084.1_529_821_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

529 - 821

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTCAGGAGG

5'SS Class:

weak_major

3'SS Sequence:

GGTCAGACACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

TGCTCCAGATTG

Flanking Amino Acid:

EYLFPTQTPVLFVVLQSCTS

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

48.6

47.2

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

52.3

0.05

1.1

41.3

42.7

Minor 5ss

-2.3

3.1

41.5

44.6

Minor BPS

43.9

-0.6

49.99

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018542

Chromosome:

PEDO01021084.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026716

89 - 933

845