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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021090.1_2616_3306_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2616 - 3306

Intron Length:
691

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGGAT

5'SS Class:
strong_major

3'SS Sequence:
GCTTCTTTTCCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTAAG

U12 Branch Point Sequence:
GAAGCTTTAAGC

Flanking Amino Acid:
KGSAALPLMNSFNLKDIPSG

Intron Amino Acid Position:
507

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91
0.97
0.8
82.1
31

Major BPS
63.3
0.33
1.6
73.3
39.1

Major PPT
84.7
0.78
0.8
76.4
37.6

Minor 5ss
30.9
-2.2
3.6
45.9
49.3

Minor BPS
50.9
0.01
1.7
56.87
41.6

Associated Gene:

Gene:
WDR24

Ensembl Gene ID:

Chromosome:
PEDO01021090.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5150
5130

21 - 5150
5130