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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021096.1_4913_5175_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4913 - 5175

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGCTGGGG

5'SS Class:

weak_major

3'SS Sequence:

CTCCCAGGTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGTGAA

U12 Branch Point Sequence:

CTGCCGTGAACC

Flanking Amino Acid:

SREGGSSKLGDVSGPRPRPV

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.1

38.7

41.2

Major BPS

48.8

-0

1.2

40.7

Major PPT

46.8

-0.1

1.7

49.5

38.3

Minor 5ss

21.7

-3.3

3.3

20.2

37.7

Minor BPS

47.7

-0.1

2.2

60.56

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028363

Chromosome:

PEDO01021096.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046462

4445 - 5681

1237