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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021104.1_1265_5252_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1265 - 5252

Intron Length:

3988

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCAGGAGGC

5'SS Class:

weak_major

3'SS Sequence:

TCCCACCCCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATCAC

U12 Branch Point Sequence:

TAACCCAGGACA

Flanking Amino Acid:

LETRTSNISGELKGDT*

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.3

59.7

38.8

Major BPS

56.9

0.17

1.1

59.7

36.1

Major PPT

48.5

-0

1.6

53.1

30.8

Minor 5ss

20.3

-3.4

4.1

28.1

37.7

Minor BPS

47.8

-0.1

1.8

60.14

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008685

Chromosome:

PEDO01021104.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009029

252 - 5271

5020