Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021107.1_7510_7613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7510 - 7613

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGGTGG

5'SS Class:

major

3'SS Sequence:

GCTGTTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCCAT

U12 Branch Point Sequence:

CATGCCCCAGCC

Flanking Amino Acid:

FCCRFCGFEQVDAEQYYGEL

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.31

1.4

52.2

47.1

Major BPS

45.8

-0.2

1.5

52.1

45.2

Major PPT

76.5

0.6

0.9

69.6

36.8

Minor 5ss

30.2

-2.3

3.3

38.2

46.8

Minor BPS

42.2

-0.6

2.1

52.66

44.4

Associated Gene:

Gene:

TMEM63C

Ensembl Gene ID:

ENSAPLG00000013211

Chromosome:

PEDO01021107.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039652

1986 - 11567

9582

ENSAPLT00000013811

1986 - 11567

9582