Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021107.1_7748_7994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7748 - 7994

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CTCCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAC

U12 Branch Point Sequence:

CAGACCTGACCC

Flanking Amino Acid:

VTFQDERMTAVILKDYSHIH

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.4

37.7

Major BPS

64.2

0.35

60.7

37.6

Major PPT

78.8

0.65

0.7

72.8

25.4

Minor 5ss

30.5

-2.2

3.1

36.8

40.4

Minor BPS

-0.2

1.8

53.15

Associated Gene:

Gene:

TMEM63C

Ensembl Gene ID:

ENSAPLG00000013211

Chromosome:

PEDO01021107.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013811

1986 - 11567

9582