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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021115.1_2690_3252_R

Intron Information:

Intron Rank:

145343

Intron Class:

major

Intron Phase:

Intron Coordinates:

2690 - 3252

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

TCCTAGTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

74.3

0.55

68.4

42.1

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

48.5

-0

2.3

69.83

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025605

Chromosome:

PEDO01021115.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025277

1376 - 9715

8340