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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021139.1_2523_2853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2523 - 2853

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAC

U12 Branch Point Sequence:

GGGTGCTCCACC

Flanking Amino Acid:

GHHGYHYWRDKWEQFDKKYL

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

44.9

-0.3

1.4

52.1

43.1

Major PPT

67.2

0.39

0.9

57.6

38.5

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

42.8

-0.5

2.3

52.03

44.9

Associated Gene:

Gene:

SLC9A5

Ensembl Gene ID:

ENSAPLG00000007747

Chromosome:

PEDO01021139.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008070

21 - 10439

10419