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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021150.1_2471_3273_R

Intron Information:

Intron Rank:

148167

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2471 - 3273

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGAGGAG

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTGCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TGCAGTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.3

49.3

41.4

Major BPS

72.5

0.56

1.1

63.4

Major PPT

82.8

0.74

0.8

81.8

30.3

Minor 5ss

22.9

-3.1

3.4

28.5

43.9

Minor BPS

45.4

-0.2

60.6

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027028

Chromosome:

PEDO01021150.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030047

21 - 4365

4345