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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021154.1_6184_6591_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6184 - 6591

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GGTGGGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

AGACCCGGCACA

Flanking Amino Acid:

MDGKYKEIAEELFCRSLAES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

56.6

0.15

46.8

41.5

Minor 5ss

-2.3

3.1

41.6

Minor BPS

39.7

-0.8

2.3

50.19

40.2

Associated Gene:

Gene:

AMPD2

Ensembl Gene ID:

ENSAPLG00000003828

Chromosome:

PEDO01021154.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003927

1458 - 7185

5728