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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021158.1_2240_2354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2240 - 2354

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTTCTTATCT

Flanking Amino Acid:

QSKTELVVMQVSANPPGPLP

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.2

0.79

0.8

76.9

37.2

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

75.3

0.87

1.5

89.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018332

Chromosome:

PEDO01021158.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020242

970 - 3294

2325

ENSAPLT00000041504

970 - 3294

2325