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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021174.1_2187_2543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2187 - 2543

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ATTCTCTCACCC

Flanking Amino Acid:

NSDLQELFRKVQRSFEDFPK

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

74.9

0.56

0.8

66.4

34.3

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

50.8

0.01

1.8

66.27

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013556

Chromosome:

PEDO01021174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014131

272 - 2636

2365