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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021180.1_948_1279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

948 - 1279

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCCC

U12 Branch Point Sequence:

CGCCCCCGCCCC

Flanking Amino Acid:

GNRRSPPPSLDAAHPTLRRG

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

14.9

-2.2

3.7

35.4

32.1

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

26.1

-1.9

3.4

37.87

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025380

Chromosome:

PEDO01021180.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039823

626 - 2253

1628