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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021190.1_11040_13370_F

Intron Information:

Intron Rank:

147868

Intron Class:

major

Intron Phase:

Intron Coordinates:

11040 - 13370

Intron Length:

2331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

GATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

GGTTGATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

80.1

0.68

0.9

73.4

41.2

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

46.1

-0.2

2.2

66.7

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029606

Chromosome:

PEDO01021190.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018394

5149 - 13693

8545