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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021200.1_1085_1554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1085 - 1554

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTAT

5'SS Class:

major

3'SS Sequence:

CCCATCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCGTCCCCATCC

Flanking Amino Acid:

TGEHGLAAAHRALASGQHRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

37.5

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

67.9

0.4

0.8

60.4

29.5

Minor 5ss

38.7

-1.3

3.4

54.5

49.7

Minor BPS

43.1

-0.5

2.1

50.9

45.8

Associated Gene:

Gene:

FAHD2A

Ensembl Gene ID:

ENSAPLG00000023945

Chromosome:

PEDO01021200.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031556

21 - 1869

1849

ENSAPLT00000026137

21 - 1869

1849